APPLICATION OF ROUGH SET THEORY IN MEDICAL HEALTH CARE DATA ANALYTICS

Published 31 Aug 2019 •  vol 129  • 


Authors:

 

Indrani Kumari Sahu, Dept. of Comp. Sc., Berhampur University, India
G K Panda, MITS School of Biotechnology, Utkal University, India
Susant Kumar Das, Dept. of Comp. Sc., Berhampur University, India

Abstract:

 

Rough Set theory (RST) is a mathematical tool and used to deal with vagueness, impreciseness, inconsistence and uncertain type knowledge. RST-based research has been applied in machine learning, inductive reasoning, decision support systems and knowledge discovery applications. Popular methods like finding of reducts, core, feature selection and reduction through the concepts of approximations have attracted researchers to use RST further in the field of high dimensional data like social networks, IoT applications and Big data analytics. In this article we make an attempt to summarize the basic concepts, characteristics of RST, some evolutionary extensions of RST and applications limited to Medical data analysis. In keeping the view of learners, a survey on RST based software tools and packages outlined with their exhaustive functionalities. It also identifies the importance of RST in the domain of medical or clinical data analytics, and also exhibits the strengths and limitations of the respective underlying approaches.

Keywords:

 

Rough Set, Reduct, Core, Medical Data Analytics, Clinical Dataset

References:

 

[1] Aboul‐Ella Hassanien, Rough set approach for attribute reduction and rule generation: A case of patients with suspected breast cancer, J. The American Society for Info.Sc.&Tech., 55(11), (2004): 954-962.
[2] Anupama, N., Kumar, S. S., & Reddy, E. S., Rough set based MRI medical image segmenta¬tion using optimized initial centroids, Int. J. Emerging Technologies in Computational and Applied Sciences, 6(1), (2013): 90-98.
[3] Blanford, J. I., Blanford S., Crane R. G., Mann M. E., Paaijman K. P. Schreiber K. V. and Thomas M. B., Implications of temperature variation for malaria parasite development across Africa, Scientific Reports 3, (2013), Article number: 1300 doi:10.1038/srep01300.
[4] Bouma, M. J., Methodological problems and amendments to demonstrate effects of temperature on the epidemiology of malaria. A new perspective on the highland epidemics in Madagascar, Trans R Soc Trop Med Hyg . 97(2):133-9, (2003): 1972-89.
[5] Chen H.-L., Yang B, Liu J., and Liu D.-Y., A support vector machine classifier with rough set-based feature selection for breast cancer diagnosis, Expert Systems with Applications, 38(7), (2011): 9014-9022.
[6] Chen You-Shyang, Cheng Ching-Hsue, Application of rough set classifiers for determining hemodialysis adequacy in ESRD patients, Springer-Verlag, Knowl Inf Syst., 34, (2013): 453-482.
[7] Craig, M.H., Snow R.W. and le Sueur D., A climate-based distribution model of malaria transmission in sub-saharan Africa, Parasitol Today, (1999): 15:105-111.
[8] Devashri Raich and P.S. Kulkarni, Application of artificial neural networks and rough set theory for the analysis of various medical problems and nephritis disease diagnosis, Advances in Intelligent Systems & Computing, Springer Int.Pub. Switzerland (2013): 83-90.
[9] Dhingra N, Jha P, Sharma VP, Cohen AA, Jotkar RM, Rodriguez PS, Adult and child malaria mortality in India: A nationally representative mortality survey, 376(9754), (2010): 1768–74.
[10] Duane J. Gubler, “Resurgent vector-borne Diseases as a global health problem, Emerging Infectious Diseases, 4(3),(1998): 442-450.
[11] Dubois, D., Prade, H., Putting rough sets and fuzzy sets together, Intelligent decision support, Handbook of applicatons and advances of the rough set theory, Kluwer Acad Publ, Dordrecht, (1992): 203-232.
[12] Femina B, Anto S, Disease diagnosis using rough set based feature selection and K-nearest neighbor classifier, Int. J. Multidisciplinary Research and Development, 2(4), (2015): 664-668.
[13] Farion,K, Michalowski, W. Slowinski, R., Wilk, S., Rubin, S. Rough set methodology in clinical practice: controlled hospital trial of the MET System, Int. Conf. Rough Sets & Current Trends in computing, Lecture Notes in AI, 3066, (2004): 805-814.
[14] Ginter, F., Pahikkala, T., Pyysalo, S., Boberg, J., Jarvinen, J., Salakoski, T., Extracting protein-protein interaction sentences by applying rough set data analysis, Int. Conf. Rough Sets and Current Trends in Computing, Lecture Notes in AI, 3066, (2004): 780-785.
[15] Greco, Salvatore, Matarazzo, Benedetto, Słowiński, Roman, Rough sets theory for multicriteria decision analysis, European Journal of Operational Research, 129 (1), (2001): 1-47.
[16] Grzegorz Iiczuk, Alicja Wakulicz-Dejz, Rough sets approach to medical diagnosis system, Int. Atlantic Web Intelligence conf., (2005): 204-210.
[17] Grzymala-Busse, J., Knowledge acquisition under uncertainty–a rough set approach, J. Intelligent and Robotics Systems, 1, (1988): 3-16.
[18] Halder, A., Dasgupta, A., Color image segmentation using rough set based k-means al¬gorithm, Int. J. Computers and Applications, 57(12): 32-37.
[19] Hassanien A.E., Abraham A, Peters J.F., and Schaefer G., Overview of rough-hybrid approaches in image processing, IEEE Conference on Fuzzy Systems, (2008): 2135-2142.
[20] Herbert, J. P.; Yao, J. T., Game-theoretic rough sets. Fundamenta Informaticae, 108(3-4), (2011):267-286.
[21] Jain P, Agrawal K , Vaishnav D, Rough set based rule generation techniques in medical diagnosis: with reference to identification of heart disease, Int. J. Scientific Research in Mathematical and Statistical Sciences, 4 (3), (2017): 12-18.
[22] Kaya Y and Uyar U, A hybrid decision support system based on rough set and extreme learning machine for diagnosis of hepatitis disease, Applied Soft Computing Journal, 13(8), (2013): 3429-3438.
[23] Kindie Biredagn Nahato, Khanna Nehemiah Harichandran, and Kannan Arputharaj, Knowledge mining from clinical datasets using rough sets & backpropagation neural network, Computational and Mathematical Methods in Medicine, Article ID 460189, (2015): (13), http://dx.doi.org/10.1155/2015/460189.
[24] Kumar A, Valecha N, Jain T, Dash AP, Burden of malaria in India: retrospective and prospective view, American Journal of Tropical Medicine and Hygiene, (2007): 69-78.
[25] Lin T. Y., Neighborhood systems and relational database, Proc. of ACM 16th annual computer science conference, (1988): 725-732.
[26] Lin,T.Y., Granulation & nearest neighborhoods, Roughset approach, granular computing: An emerging paradigm, 70(2001): 125-142.
[27] Manimara A, Chandrasekaran V. M. , Asesh Aishwarya, Rough set approach for an efficient medical diagnosis system, Int. J. Pharmacy and Technology, 7(1), (2015): 8049-8060.
[28] Margret A.S., Clara Madonna L. J., Jeevitha P., Nandhini R.T., Design of a diabetic diagnosis system using rough sets, Cybernetics and Information Technologies, 13(3), (2013): 124-139.
[29] Meenachi1 L, Ramakrishnan S, Arunithi M., Karthiga R. Karthika S, Nandhini P, Diagnosis of cancer using fuzzy rough set theory, Int. Research J. of Engg. & Tech.(IRJET), 03(01), (2016): 1203-1208.
[30] Midelfart H., Komorowski, H.J., Norsett, K. Yadetie, F., Sandvik, A.K., Laegreid, A, Learning rough set classifiers from gene expressions and clinical data, Fundamenta Informaticae, 53(2), (2002): 155-183.
[31] Mohapatra, S., Patra, D., & Kumar, K., Unsupervised leukocyte image segmentation using rough fuzzy clustering, ISRN Artificial Intelligence., (2012): 1-14. doi:10.5402/2012/923946.
[32] NaliniPriya, G., Kannan A and Ananahakumar P, Dynamic context adaptation for diagnosing the heart disease in healthcare environment using optimized rough set approach. Int. J. on Soft Computing (IJSC), 3(2), (2012): 23-33.
[33] Ningler, M., Stockmanns,G., Schneider, G., Dressler, O., Kochs, E. F., Rough set-based classification of EEG-signals to detect intraope- rative awareness: Comparison of fuzzy and crisp discretization of real value attributes, Proc. of Int. Conf. on Rough Sets and Current Trends in Computing, Lecture Notes in A.I. 3066, (2004): 825-834.
[34] Pawlak Z., Rough Sets, Int. Jour. Inf. Comp.Sc., II, (1982): 341-356.
[35] Payel Roy, Srijan Goswami, Sayan Chakraborty, Ahmad Taher Azar, Nilanjan Dey, Image segmentation using rough set theory: A review, Int. J. of Rough Sets and Data Analysis, 1(2), (2014): 62-74.
[36] Piotr Paszek, Alicja Wakulicz-Deja, Applying rough set theory to medical diagnosing, Intl. Conf. on Rough Sets and Intelligent Systems Paradigms, (2007): 427-435.
[37] Senthilkumaran N. , Rajesh R., A study on rough set theory for medical image segmentation, Int. J. of Recent Trends in Engineering, 2(2), (2009): 236-238.
[38] Skowron, A., Stepaniuk J., Tolerance approximation spaces, Fundamenta Informaticae. 27 (2-3), (1996): 245-253.
[39] Tomasz KANIK, Ing., Hepatitis disease diagnosis using rough set, ICTIC 2012, (2012): 19- 23.
[40] Tripathy B.K., Acharjya D. P. and Cynthya1 V., A framework for intelligent medical diagnosis using rough set with formal concept analysis, Int. J. of A. I. & Applications (IJAIA), 2(2), (2011): 45-66.
[41] Yao, Y.Y., Wong, S.K.M., and Lingras, P., A decision-theoretic rough set model, Methodologies for Intelligent Systems, Proc. 5th Int. Symposium on Methodologies for Intelligent Systems, Knoxville, Tennessee, USA, (1990): 25-27.
[42] Xian-Ming Huang, Yan-Hong-Zhang, A new application of rough set to ECG recognition, Proc. 2nd Int. Conf. on Machine Learning and Cybernetics, (2003): 1729-1734.
[43] Yi Xie, On medical image filtering based on rough set theory, 5th Int. Conf. on fuzzy systems and knowledge discovery, IEEE, (2008): 276-280.
[44] Zadeh L. A., Fuzzy Sets, Information & Control, 8, (1965): 338-353.
[45] Ziarka, W., Variable precission rough set model, J. Computer & System Sciences, 46(1), (1993): 39-59.
[46] Zhu, F, Wang. F. Y., Some results on covering generalized rough sets, Pattern Recognition and Artificial Intelligence, 15(1), (2002): 6-13.

Citations:

 

APA:
Sahu, I. K., Panda, G. K., & Das, S. K. (2019). Application of Rough Set Theory in Medical Health Care Data Analytics. International Journal of Advanced Science and Technology (IJAST), ISSN: 2005-4238(Print); 2207-6360 (Online), NADIA, 129, 29-42. doi: 10.33832/ijast.2019.129.03.

MLA:
Sahu, Indrani Kumari, et al. “Application of Rough Set Theory in Medical Health Care Data Analytics.” International Journal of Advanced Science and Technology, ISSN: 2005-4238(Print); 2207-6360 (Online), NADIA, vol. 129, 2019, pp. 29-42. IJAST, http://article.nadiapub.com/IJAST/Vol129/3.html.

IEEE:
[1] I. K. Sahu, G. K. Panda, and S. K. Das, “Application of Rough Set Theory in Medical Health Care Data Analytics.” International Journal of Advanced Science and Technology (IJAST), ISSN: 2005-4238(Print); 2207-6360 (Online), NADIA, vol. 129, pp. 29-42, Aug. 2019.